Month: January 2024

Antifragility as a complex system’s response to perturbations, volatility, and time

Cristian Axenie, Oliver López-Corona, Michail A. Makridis, Meisam Akbarzadeh, Matteo Saveriano, Alexandru Stancu, Jeffrey West

Antifragility characterizes the benefit of a dynamical system derived from the variability in environmental perturbations. Antifragility carries a precise definition that quantifies a system’s output response to input variability. Systems may respond poorly to perturbations (fragile) or benefit from perturbations (antifragile). In this manuscript, we review a range of applications of antifragility theory in technical systems (e.g., traffic control, robotics) and natural systems (e.g., cancer therapy, antibiotics). While there is a broad overlap in methods used to quantify and apply antifragility across disciplines, there is a need for precisely defining the scales at which antifragility operates. Thus, we provide a brief general introduction to the properties of antifragility in applied systems and review relevant literature for both natural and technical systems’ antifragility. We frame this review within three scales common to technical systems: intrinsic (input-output nonlinearity), inherited (extrinsic environmental signals), and interventional (feedback control), with associated counterparts in biological systems: ecological (homogeneous systems), evolutionary (heterogeneous systems), and interventional (control). We use the common noun in designing systems that exhibit antifragile behavior across scales and guide the reader along the spectrum of fragility-adaptiveness-resilience-robustness-antifragility, the principles behind it, and its practical implications.

Read the full article at: arxiv.org

A tiny fraction of all species forms most of nature: Rarity as a sticky state

Egbert H. van Nes, Diego G. F. Pujoni, Sudarshan A. Shetty, Gerben Straatsma, Willem M. de Vos, Marten Scheffer

PNAS 121 (2) e2221791120

Data from the human microbiome as well as communities of flies, rodents, fish, trees, plankton, and fungi suggest that consistently a tiny fraction of the species accounts for most of the biomass. We suggest that this may be due to an overlooked phenomenon that we call “stickiness” of rarity. This can arise in groups of species that are equivalent in resource use but differ in their response to stochastic stressors such as weather extremes and disease outbreaks. Stickiness is not absolute though. In our simulations, as well as natural time series from microbial communities, rare species occasionally replace dominant ones that collapse, supporting the insurance theory of biodiversity. Rare species may play an important role as backups stabilizing ecosystem functioning.

Read the full article at: www.pnas.org

Infodynamics, a Review

Klaus Jaffe

A review of studies on the interaction of information with the physical world found no fundamental contradiction between the eighth authors promoting Infodynamics. Each one emphasizes different aspects. The fact that energy requires information in order to produce work and that the acquisition of new information requires energy, triggers synergistic chain reactions producing increases of negentropy (increases in Useful Information or decreases in Information Entropy) in living systems. Infodynamics aims to study feasible balances between energy and information using empirical methods. Getting information requires energy and so does separating useful information from noise. Producing energy requires information, but there is no direct proportionality between the energy required to produce the information and the energy unleashed by this information. Energy and information are parts of two separate realms of reality that are intimately entangled but follow different laws of nature. Infodynamics recognizes multiple forms and dimensions of information. Information can be the opposite of thermodynamic entropy (Negentropy), a trigger of Free Energy (Useful or Potentially Useful), a reserve (Redundant Information), Structural, Enformation, Intropy, Entangled, Encrypted Information or Noise. These are overlapping functional properties focusing on different aspects of Information. Studies on information entropy normally quantify only one of these dimensions. The challenge of Infodynamics is to design empirical studies to overcome these limitations. The working of sexual reproduction and its evolution through natural selection and its role in powering the continuous increase in information and energy in living systems might teach us how.

Read the full article at: www.qeios.com

Critical phenomena in complex networks: from scale-free to random networks

Alexander Nesterov & Pablo Héctor Mata Villafuerte

The European Physical Journal B Volume 96, article number 143, (2023)

Within the conventional statistical physics framework, we study critical phenomena in configuration network models with hidden variables controlling links between pairs of nodes. We obtain analytical expressions for the average node degree, the expected number of edges in the graph, and the Landau and Helmholtz free energies. We demonstrate that the network’s temperature controls the average node degree in the whole network. We also show that phase transition in an asymptotically sparse network leads to fundamental structural changes in the network topology. Below the critical temperature, the graph is completely disconnected; above the critical temperature, the graph becomes connected, and a giant component appears. Increasing temperature changes the degree distribution from power-degree for lower temperatures to a Poisson-like distribution for high temperatures. Our findings suggest that temperature might be an inalienable property of real networks.

Read the full article at: link.springer.com

SHEEP, a Signed Hamiltonian Eigenvector Embedding for Proximity

Shazia’Ayn Babul & Renaud Lambiotte 

Communications Physics volume 7, Article number: 8 (2024

Signed network embedding methods allow for a low-dimensional representation of nodes and primarily focus on partitioning the graph into clusters, hence losing information on continuous node attributes. Here, we introduce a spectral embedding algorithm for understanding proximal relationships between nodes in signed graphs, where edges can take either positive or negative weights. Inspired by a physical model, we construct our embedding as the minimum energy configuration of a Hamiltonian dependent on the distance between nodes and locate the optimal embedding dimension. We show through a series of experiments on synthetic and empirical networks, that our method (SHEEP) can recover continuous node attributes showcasing its main advantages: re-configurability into a computationally efficient eigenvector problem, retrieval of ground state energy which can be used as a statistical test for the presence of strong balance, and measure of node extremism, computed as the distance to the origin in the optimal embedding.

Read the full article at: www.nature.com